Research interests:
Biological omics data analysis, biological network dynamics analysis and dynamics of pattern spatio-temporal.
Scientific Publications:
2020
Yuangen Yao⁎, Huiyu Zhang, Haiyou Deng. milRNApredictor: Genome-free prediction of fungi milRNAs by incorporating k-mer scheme and distance-dependent pair potential. Genomics. 2020, 112(3): 2233-2240.
Guanghui Cheng, Weidan Liu, Rong Gui, Yuangen Yao*. Sine-Wiener bounded noise-induced logical stochastic resonance in a two-well potential system. Chaos, Solitons & Fractals. 2020, 131, 109514
Rong Gui, Yue Wang, Yuangen Yao*, Guanghui Cheng. Enhanced logical vibrational resonance in a two-well potential system. Chaos, Solitons & Fractals. 2020 (In press)
2019
Yuangen Yao∗, Chunwei Su, Juan Xiong. Enhancement of weak signal detection in the Hodgkin–Huxley neuron subjected to electromagnetic fluctuation. Physica A.2019, 531, 121734
Guanghui Cheng, Rong Gui, Yuangen Yao∗. Enhancement of temporal regularity and degradation of spatial synchronization induced by cross-correlated sine-Wiener noises in regular and small-world neuronal networks. Physica A. 2019, 520, 361–369
Yuangen Yao, Ming Yi, Dejia Hou∗ Delay-induced synchronization transition in a small-world neuronal network of FitzHugh–Nagumo neurons subjected to sine-Wiener bounded noise. International Journal of Modern Physics B. 2019, 33, 1950053
2018
Yuangen Yao, Chengzhang Ma, Canjun Wang, Ming Yi, Rong Gui*. Detection of sub-threshold periodic signal by multiplicative and additive cross-correlated sine-Wiener noises in the FitzHugh–Nagumo neuron. Physica A: Statistical Mechanics and its Applications. 492, 1247-1256, 2018.( IF: 2.243)
Yuangen Yao, Jun Ma. Weak periodic signal detection by sine-Wiener-noise-induced resonance in the FitzHugh–Nagumo neuron. Cognitive Neurodynamics. 2018.( IF: 1.828)
Yuangen Yao, Lijian Yang, Canjun Wang, Quan Liu, Rong Gui, Juan Xiong, Ming Yi*. Subthreshold periodic signal detection by bounded noise-induced resonance in the FitzHugh-Nagumo neuron. Complexity. 5632650, 2018( IF:4.621)
Yuangen Yao, Wei Cao, Qiming Pei, Chengzhang Ma*, Ming Yi. Breakup of spiral wave and order-disorder spatial pattern transition induced by spatially uniform cross-correlated sine-Wiener noises in a regular network of Hodgkin-Huxley neurons. Complexity. 8793298, 2018.( IF:4.621)
Yuangen Yao, Jun Ma*. Signal transmission by autapse with constant or time-periodic coupling intensity in the FitzHugh–Nagumo neuron. Eur. Phys. J. Special Topics. 2018, 227, 757–766.
2017
Yuangen Yao, Chengzhang Ma, Haiyou Deng, Quan Liu, Wei Cao, Rong Gui, Tianquan Feng, Ming Yi*. Dynamics and robustness of the cardiac progenitor cell induced pluripotent stem cell network during cell phenotypes transition. IET Systems Biology. 2017, 11:1, 1-7 (SCI收录, IF: 0.764)
Yuangen Yao, Haiyou Deng, Ming Yi, Jun Ma*. Impact of bounded noise on the formation and instability of spiral wave in a 2D lattice of neurons. Scientific Reports. 2017, 7: 43151 ( IF=5.228)
Yuangen Yao, Haiyou Deng, Chengzhang Ma, Ming Yi, Jun Ma*. Impact of bounded noise and rewiring on the formation and instability of spiral waves in a small-world network of Hodgkin-Huxley neurons. 2017, 12:1, e0171273 ( IF: 3.057)
Yuangen Yao, Ming Yi, Dejia Hou*. Coherence resonance induced by cross-correlated sine-Wiener noises in the FitzHugh-Nagumo neurons. International Journal of Modern Physics B. 2017, ( IF: 0.85)
Yuangen Yao, Rong Gui, Quan Liu, Ming Yi, Haiyou Deng*. Diverse effects of distance cutoff and residue interval on the performance of distance-dependent atom-pair potential in protein structure prediction. BMC bioinformatics. 18(1), 542, 2017.( IF:2.448)
2016
Haiyou Deng, Quan Liu, Wei Cao, Rong Gui, Chengzhang Ma, Yuangen Yao *.qiRNApredictor: A Novel Computational Program for the Prediction of qiRNAs in Neurospora crassa. PLOS ONE, 2016, 11:7. (SCI收录, IF: 3.057)
Yuangen Yao, Chengzhang Ma, Haiyou Deng, Quan Liu, Jiying Zhang and Ming Yi*. plantMirP: an efficient computational program for the prediction of plant pre-miRNA by incorporating knowledge-based energy features. Molecular BioSystems, 2016, 12, 3124~3131 (SCI收录, IF: 2.829)
2014
Yuangen Yao ,Lili Ma, Qiong Jia, Wankun Deng, Zexian Liu, Yuanwei Zhang, Jian Ren, Yu Xue, Haibo Jia* and Qing Yang*. Systematic characterization of small RNAome during zebrafish early developmental stages. BMC Genomics, 2014, 15:117. (SCI收录, IF:4.6)